What is LectomeXplore ?
LectomeXplore is a module dedicated to the exploration of predicted lectins for each class from UniLectin3D classification. Translated genomes (proteomes) released in the UniProtKB and RefSeq sequence databases and in the PDB structure database were screened to identify the lectome (complete set of lectins) of the corresponding species.
How many predicted lectins ?
Proteins with a specific lectin domain: 993249 candidate lectins in 24156 species
At score > 0.25 = 25% similarity: 569975 lectins in 17754 species
At score > 0.5 = 50% similarity: 120523 lectins in 7755 species
Last update the 2021-03-25 10:19:38 - list of all species
ie. Salmonis, Mycobacterium, B9ENV9 (UniProt accession number)
Search by field
Search for domain architecture
Browse the lectin classes by fold and origin
Phylogeny heatmap of the lectin classes
Predicted lectins with a minimum similarity of 50%
How to cite: François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek, LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification, Nucleic Acids Research
doi.org/10.1093/nar/gkaa1019