LectomeXplore - Database of predicted lectins

What is LectomeXplore ?
LectomeXplore is a module dedicated to the exploration of predicted lectins for each of the 107 classes from UniLectin3D classification. Translated genomes (proteomes) released in the UniProtKB and RefSeq sequence databases and in the PDB structure database were screened to identify the lectome (complete set of lectins) of the corresponding species.
How many predicted lectins ?
Proteins with a specific lectin domain: 561926 candidate lectins in 17470 species
At score > 0.25 = 25% similarity: 347521 lectins in 11658 species
At score > 0.5 = 50% similarity: 70548 lectins in 4135 species
Last update the 2020-10-09 12:11:13

ie. Salmonis, Mycobacterium, B9ENV9(UniProt AC) ...

Search by field

Search for domains architectures

Browse the lectin classes by fold and origin

Phylogeny heatmap of the lectin classes

LectomeXplore Bacteria - Identified bacterial lectins

Predicted lectins with a minimum similarity of 50%
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How to cite: F Bonnardel, S M. Haslam, A Dell, T Feizi, Y Liu, V Tajadura-Ortega, Y Akune, L Sykes, P R. Bennett, D A. MacIntyre, F Lisacek, A Imberty. Proteome-wide prediction of bacterial carbohydrate-binding proteins as a tool for understanding commensal and pathogen colonisation of the vaginal microbiome. doi.org/10.1101/2020.09.10.291781